Differences

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--- glacios_interface [2022/02/11 13:02] – created bonnefon
+++ glacios_interface [2023/11/01 20:18] (current) – external edit 127.0.0.1
@@ Line 2: / Line 2: @@
-====== The microscope console ======
+===== The microscope console =====
 **Location**: right in front of you on the desk
@@ Line 14: / Line 14: @@
   * and many other actions through the programmable switches (L/R1-2-3) and Multifunction X/Y knobs.
-====== Gatan DigitalMicrograph (DM) ======
+----
-**Location**: on the left screen
+===== Gatan DigitalMicrograph User Interface (DM) =====
-**Role**: it controls the K2 direct electron detector
+**Location**: On the left screen
-The beginner user will not use it. ++The expert user will use it to:|<div>
+**Role**: It controls the K2 direct electron detector.
+  * The beginner user will not use it.
+  * ++The expert user will use it to:|<div>
   * prepare Dark, linear and counting / Super Resolution gain references.
   * measure the dose.
@@ Line 27: / Line 30: @@
   * perform cryo-cycle of the detector
 </div>++
+----
+===== SerialEM User Interface (SEM) =====
+**Location**: On the left screen
+**Role**: It provides camera/microscope commands to allow the user to screen its grids and setup an automated data collection.
+  * ++The beginner user will use it to:|<div>
+  * record the Atlases.
+  * select squares and prepare the square maps at eucentric height.
+  * select targets (holes).
+  * screen targets (holes).
+</div>++
+  * ++The expert user will use it to:|<div>
+  * perform all the actions described above.
+  * perform beam corrections (astigmatism, coma-free).
+  * perform calibrations.
+  * setup the dose rate, total dose and dose fractionning.
+  * setup the time and imaging modes for the different beam modes.
+  * center the different beam modes all together on the camera axis.
+</div>++
+----
+===== The TEM User Interface (TEM) =====
+**Location**: On the middle screen
+**Role**: It controls all the microscope systems.
+  * ++The beginner user will use it to:|<div>
+  * dock/undock the cassette from the NanoCab to the autoloader.
+  * load/unload the grids in the column.
+  * change and center the Condenser 2 and objective apertures.
+  * control the autoloader turbo pump.
+  * perform beam-shift adjustments.
+  * manually set eucentric height.
+</div>++
+  * ++The expert user will use it to:|<div>
+  * perform all the actions described above.
+  * align the microscope.
+  * troubleshoot the system.
+  * manage the cold system.
+  * perform cryo-cycle of the column/autoloader.
+</div>++
+----
+===== The FluCam User Interface (FC) =====
+**Location**: On the right screen
+**Role**: It allows the visualization of the electron beam and the sample image.
+  * ++The beginner user will use it to:|<div>
+  * center the beams.
+  * center Condenser 2 and objective apertures.
+  * look for and move to particular features on their grids.
+  * manually set eucentric height.
+</div>++
+  * ++The expert user will use it to:|<div>
+  * perform all the actions described above.
+  * align the microscope.
+</div>++