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hpc_relion [2023/11/09 12:34] – created Luc Bonnefondhpc_relion [2023/11/09 12:54] (current) – Luc Bonnefond
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 **2023-11-09** **2023-11-09**
  
-Relion-5 is now installed on the Unistra HPC (hpc-login.u-strasbg.fr). To use it simply load the module: module load relion/relion-5.0+**Relion-5** is now installed on the Unistra HPC (hpc-login.u-strasbg.fr). To use it simply load the module: <code>module load relion/relion-5.0</code>
 The new version of Relion comes with: The new version of Relion comes with:
-1) Blush regularisation: a machine-learning based prior that improves 3D refinement and classification of low SNR data sets+ 
 +1) **Blush regularisation**: a machine-learning based prior that improves 3D refinement and classification of low SNR data sets
 [[https://www.biorxiv.org/content/10.1101/2023.10.23.563586v1]] [[https://www.biorxiv.org/content/10.1101/2023.10.23.563586v1]]
  
-2) DynaMight: a variational auto-encoder for modelling continuous structural heterogeneity and a deformed backprojection algorithm for reconstruction of improved consensus maps+2) **DynaMight**: a variational auto-encoder for modelling continuous structural heterogeneity and a deformed backprojection algorithm for reconstruction of improved consensus maps
 [[https://www.biorxiv.org/content/10.1101/2023.10.18.562877v1]] [[https://www.biorxiv.org/content/10.1101/2023.10.18.562877v1]]
  
-3) ModelAngelo: a machine-learning approach for automated atomic model building and identification of unknown proteins in cryo-EM maps+3) **ModelAngelo**: a machine-learning approach for automated atomic model building and identification of unknown proteins in cryo-EM maps
 [[https://www.biorxiv.org/content/10.1101/2023.05.16.541002v2]] [[https://www.biorxiv.org/content/10.1101/2023.05.16.541002v2]]
  
 4) Select subsets of filaments using dendrograms make from 2D class averaging assignments 4) Select subsets of filaments using dendrograms make from 2D class averaging assignments
-https://www.biorxiv.org/content/10.1101/2023.07.24.550295v1+[[https://www.biorxiv.org/content/10.1101/2023.07.24.550295v1]]
  
 5) Support for AMD and Intel GPUs (CUDA and intel CPU-acceleration continue to work too) 5) Support for AMD and Intel GPUs (CUDA and intel CPU-acceleration continue to work too)
hpc_relion.1699533293.txt.gz · Last modified: by Luc Bonnefond